Bioconductor Motif analysis

Showing : motif analysis • reset

0

votes

0

replies

916

views

pwm motifs jaspar meme motif analysis

6.0 years ago rbronste ▴ 60

2

votes

5

replies

2.8k

views

motifbreakR vcf snps motif analysis

updated 6.4 years ago by Valerie Obenchain ★ 6.8k • written 6.4 years ago by svlachavas ▴ 830

0

votes

1

reply

1.3k

views

HOMER Motif Analysis

updated 6.9 years ago by Ou, Jianhong ★ 1.3k • written 6.9 years ago by JMallory • 0

3 results • Page 1 of 1

Recent ...

Replies

Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by rania.alanany • 0

Hi Robert, Thank you for the explanation, But I am still little bit confused, Is the annotation package (TxDb.Hsapiens.UCSC.hg38.knownGene)…

Comment: Merge Replicates vs Mixed Model by abadgerw • 0

@gabrielhoffman any insight?

Comment: makeContrastsDream for Interaction by abadgerw • 0

@gabrielhoffman any insight?

Comment: ColData and ERROR: rows did not converge in beta, labelled in mcols(object)$beta by Michael Love 42k

That is the rows that did converge.

Answer: Is my time course analysis with DESeq2 valid? by Michael Love 42k

For choosing the correct statistical design, I recommend working with a local statistician or someone familiar with linear models in R. I h…

Votes

A: Some questions for remove batch effect by using mnnCorrect

A: Recommendations for combining multiple 10x runs into one SingleCellExperiment

Answer: [How to construct a model.matrix ]

Answer: Handling biological replicates in DESeq2

Comment: biomaRt rnorvegicus_gene_ensembl not available anymore

Awards • All

Popular Question to Michael Stadler ▴ 350

Scholar to ATpoint ★ 4.5k

Commentator to James W. MacDonald 67k

Popular Question to Stefano Mangiola ▴ 20